HL_7SSL_081

3D structure

PDB id

7SSL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

7SSL|1|3|U|421

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SSL_081 not in the Motif Atlas

Homologous match to HL_6CZR_082

Geometric discrepancy: 0.5696

The information below is about HL_6CZR_082

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50006.1

Basepair signature

cWW-F-F

Number of instances in this motif group

6

Unit IDs

7SSL|1|3|C|419
7SSL|1|3|U|420
7SSL|1|3|U|421
7SSL|1|3|C|422
7SSL|1|3|G|423
7SSL|1|3|G|424

Current chains

Chain 3

16S rRNA

Nearby chains

Chain H

30S ribosomal protein S3

Chain I

30S ribosomal protein S4