HL_7SSL_086

3D structure

PDB id

7SSL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CGAAGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SSL_086 not in the Motif Atlas

Geometric match to HL_1WZ2_007

Geometric discrepancy: 0.1292

The information below is about HL_1WZ2_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

7SSL|1|3|C|726
7SSL|1|3|G|727
7SSL|1|3|A|728
7SSL|1|3|A|729
7SSL|1|3|G|730
7SSL|1|3|G|731

Current chains

Chain 3

16S rRNA

Nearby chains

Chain T

30S ribosomal protein S15

Chain Z

30S ribosomal protein S21