HL_7SSL_101
3D structure
- PDB id
- 7SSL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GGGAAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7SSL_101 not in the Motif Atlas
- Geometric match to HL_4WF9_031
- Geometric discrepancy: 0.3074
- The information below is about HL_4WF9_031
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.7
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 349
Unit IDs
7SSL|1|3|G|1515
7SSL|1|3|G|1516
7SSL|1|3|G|1517
7SSL|1|3|A|1518
7SSL|1|3|A|1519
7SSL|1|3|C|1520
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
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