HL_7SSL_115

3D structure

PDB id

7SSL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CGACGCUUAUGCGUUG

Length

16 nucleotides

Bulged bases

7SSL|1|1|U|1174, 7SSL|1|1|A|1175

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SSL|1|1|C|1167
7SSL|1|1|G|1168
7SSL|1|1|A|1169
7SSL|1|1|C|1170
7SSL|1|1|G|1171
7SSL|1|1|C|1172
7SSL|1|1|U|1173
7SSL|1|1|U|1174
7SSL|1|1|A|1175
7SSL|1|1|U|1176
7SSL|1|1|G|1177
7SSL|1|1|C|1178
7SSL|1|1|G|1179
7SSL|1|1|U|1180
7SSL|1|1|U|1181
7SSL|1|1|G|1182

Current chains

Chain 1

23S rRNA

Nearby chains

Chain l

50S ribosomal protein L15

Chain z

50S ribosomal protein L30