HL_7SSN_026

3D structure

PDB id

7SSN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAAACAAC

Length

8 nucleotides

Bulged bases

7SSN|1|1|A|983, 7SSN|1|1|A|984

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SSN_026 not in the Motif Atlas

Homologous match to HL_7A0S_027

Geometric discrepancy: 0.172

The information below is about HL_7A0S_027

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47171.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

7SSN|1|1|G|978
7SSN|1|1|A|979
7SSN|1|1|A|980
7SSN|1|1|A|981
7SSN|1|1|C|982
7SSN|1|1|A|983
7SSN|1|1|A|984
7SSN|1|1|C|985

Current chains

Chain 1

23S rRNA

Nearby chains

Chain q

50S ribosomal protein L20

Chain r

50S ribosomal protein L21

Chain z

50S ribosomal protein L30