HL_7SSN_042

3D structure

PDB id

7SSN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCUCGCG

Length

7 nucleotides

Bulged bases

7SSN|1|1|U|1729, 7SSN|1|1|C|1732

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SSN_042 not in the Motif Atlas

Homologous match to HL_5J7L_214

Geometric discrepancy: 0.5695

The information below is about HL_5J7L_214

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

7SSN|1|1|C|1727
7SSN|1|1|C|1728
7SSN|1|1|U|1729
7SSN|1|1|C|1730
7SSN|1|1|G|1731
7SSN|1|1|C|1732
7SSN|1|1|G|1733

Current chains

Chain 1

23S rRNA

Nearby chains