HL_7SSN_082

3D structure

PDB id

7SSN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

7SSN|1|3|U|467

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SSN_082 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.3252

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7SSN|1|3|G|462
7SSN|1|3|U|463
7SSN|1|3|U|464
7SSN|1|3|A|465
7SSN|1|3|A|466
7SSN|1|3|U|467
7SSN|1|3|A|468
7SSN|1|3|C|469
7SSN|1|3|C|470

Current chains

Chain 3

16S rRNA

Nearby chains