HL_7SSO_028

3D structure

PDB id

7SSO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGUAAUAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SSO_028 not in the Motif Atlas

Homologous match to HL_7RQB_030

Geometric discrepancy: 0.4253

The information below is about HL_7RQB_030

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SSO|1|1|C|1092
7SSO|1|1|G|1093
7SSO|1|1|U|1094
7SSO|1|1|A|1095
7SSO|1|1|A|1096
7SSO|1|1|U|1097
7SSO|1|1|A|1098
7SSO|1|1|G|1099

Current chains

Chain 1

23S rRNA

Nearby chains

Chain F

50S ribosomal protein L36

Chain f

50S ribosomal protein L6

Chain i

50S ribosomal protein L11