HL_7SSO_079

3D structure

PDB id

7SSO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

7SSO|1|3|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SSO_079 not in the Motif Atlas

Homologous match to HL_4LFB_009

Geometric discrepancy: 0.2593

The information below is about HL_4LFB_009

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

7SSO|1|3|C|342
7SSO|1|3|U|343
7SSO|1|3|A|344
7SSO|1|3|C|345
7SSO|1|3|G|346
7SSO|1|3|G|347

Current chains

Chain 3

16S rRNA

Nearby chains

Chain k

50S ribosomal protein L14

Chain p

50S ribosomal protein L19