HL_7SSO_082

3D structure

PDB id

7SSO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

7SSO|1|3|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SSO_082 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.2246

The information below is about HL_5J7L_012

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7SSO|1|3|G|462
7SSO|1|3|U|463
7SSO|1|3|U|464
7SSO|1|3|A|465
7SSO|1|3|A|466
7SSO|1|3|U|467
7SSO|1|3|A|468
7SSO|1|3|C|469
7SSO|1|3|C|470

Current chains

Chain 3

16S rRNA

Nearby chains