HL_7SSW_027

3D structure

PDB id

7SSW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Late translocation intermediate with EF-G dissociated (Structure VI)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

7SSW|1|1|U|1066, 7SSW|1|1|A|1067, 7SSW|1|1|A|1070

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SSW_027 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.3657

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.1

Basepair signature

cWW-cWW

Number of instances in this motif group

2

Unit IDs

7SSW|1|1|C|1064
7SSW|1|1|U|1065
7SSW|1|1|U|1066
7SSW|1|1|A|1067
7SSW|1|1|G|1068
7SSW|1|1|A|1069
7SSW|1|1|A|1070
7SSW|1|1|G|1071
7SSW|1|1|C|1072
7SSW|1|1|A|1073
7SSW|1|1|G|1074

Current chains

Chain 1

23S rRNA

Nearby chains

Chain i

50S ribosomal protein L11