HL_7SSW_034

3D structure

PDB id

7SSW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Late translocation intermediate with EF-G dissociated (Structure VI)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

7SSW|1|1|U|1396

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7SSW_034 not in the Motif Atlas

Homologous match to HL_5J7L_168

Geometric discrepancy: 0.2675

The information below is about HL_5J7L_168

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81545.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7SSW|1|1|G|1389
7SSW|1|1|U|1390
7SSW|1|1|U|1391
7SSW|1|1|A|1392
7SSW|1|1|A|1393
7SSW|1|1|U|1394
7SSW|1|1|A|1395
7SSW|1|1|U|1396
7SSW|1|1|U|1397
7SSW|1|1|C|1398

Current chains

Chain 1

23S rRNA

Nearby chains

Chain t

50S ribosomal protein L23