HL_7ST2_022

3D structure

PDB id

7ST2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGAAAGG

Length

7 nucleotides

Bulged bases

7ST2|1|1|A|781, 7ST2|1|1|G|784

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ST2_022 not in the Motif Atlas

Geometric match to HL_1P6V_001

Geometric discrepancy: 0.2928

The information below is about HL_1P6V_001

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_53890.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

15

Unit IDs

7ST2|1|1|U|779
7ST2|1|1|G|780
7ST2|1|1|A|781
7ST2|1|1|A|782
7ST2|1|1|A|783
7ST2|1|1|G|784
7ST2|1|1|G|785

Current chains

Chain 1

23S rRNA

Nearby chains

Chain b

50S ribosomal protein L2