HL_7ST2_052

3D structure

PDB id

7ST2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

7ST2|1|1|G|2250

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ST2_052 not in the Motif Atlas

Homologous match to HL_7RQB_053

Geometric discrepancy: 0.0852

The information below is about HL_7RQB_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ST2|1|1|C|2248
7ST2|1|1|U|2249
7ST2|1|1|G|2250
7ST2|1|1|G|2251
7ST2|1|1|G|2252
7ST2|1|1|G|2253
7ST2|1|1|C|2254
7ST2|1|1|G|2255
7ST2|1|1|G|2256

Current chains

Chain 1

23S rRNA

Nearby chains

Chain 5

Transfer RNA; tRNA

Chain m

50S ribosomal protein L16

Chain w

50S ribosomal protein L27