HL_7ST6_006

3D structure

PDB id

7ST6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation, non-rotated 70S ribosome (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

7ST6|1|1|A|196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ST6_006 not in the Motif Atlas

Geometric match to HL_4WF9_006

Geometric discrepancy: 0.1577

The information below is about HL_4WF9_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

7ST6|1|1|G|194
7ST6|1|1|A|195
7ST6|1|1|A|196
7ST6|1|1|A|197
7ST6|1|1|C|198
7ST6|1|1|A|199
7ST6|1|1|U|200
7ST6|1|1|C|201

Current chains

Chain 1

23S rRNA

Nearby chains

Chain 7

Transfer RNA; tRNA

Chain l

50S ribosomal protein L15

Chain x

50S ribosomal protein L28