HL_7ST6_042

3D structure

PDB id

7ST6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre translocation, non-rotated 70S ribosome (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCUCGCG

Length

7 nucleotides

Bulged bases

7ST6|1|1|U|1729, 7ST6|1|1|C|1732

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ST6_042 not in the Motif Atlas

Geometric match to HL_361D_002

Geometric discrepancy: 0.2833

The information below is about HL_361D_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.3

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

7ST6|1|1|C|1727
7ST6|1|1|C|1728
7ST6|1|1|U|1729
7ST6|1|1|C|1730
7ST6|1|1|G|1731
7ST6|1|1|C|1732
7ST6|1|1|G|1733

Current chains

Chain 1

23S rRNA

Nearby chains