HL_7ST6_108
3D structure
- PDB id
- 7ST6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre translocation, non-rotated 70S ribosome (Structure I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GUUCAAAUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ST6_108 not in the Motif Atlas
- Homologous match to HL_6UFM_003
- Geometric discrepancy: 0.1292
- The information below is about HL_6UFM_003
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.3
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 135
Unit IDs
7ST6|1|6|G|53
7ST6|1|6|U|54
7ST6|1|6|U|55
7ST6|1|6|C|56
7ST6|1|6|A|57
7ST6|1|6|A|58
7ST6|1|6|A|59
7ST6|1|6|U|60
7ST6|1|6|C|61
Current chains
- Chain 6
- tRNA fMet
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain e
- 50S ribosomal protein L5
- Chain m
- 50S ribosomal protein L16
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