HL_7ST7_027
3D structure
- PDB id
- 7ST7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CUUAGAAGCAG
- Length
- 11 nucleotides
- Bulged bases
- 7ST7|1|1|U|1066, 7ST7|1|1|A|1070
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ST7_027 not in the Motif Atlas
- Geometric match to HL_2Y8Y_001
- Geometric discrepancy: 0.3834
- The information below is about HL_2Y8Y_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81100.2
- Basepair signature
- cWW
- Number of instances in this motif group
- 3
Unit IDs
7ST7|1|1|C|1064
7ST7|1|1|U|1065
7ST7|1|1|U|1066
7ST7|1|1|A|1067
7ST7|1|1|G|1068
7ST7|1|1|A|1069
7ST7|1|1|A|1070
7ST7|1|1|G|1071
7ST7|1|1|C|1072
7ST7|1|1|A|1073
7ST7|1|1|G|1074
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain 8
- Elongation factor G
- Chain i
- 50S ribosomal protein L11
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