HL_7ST7_059
3D structure
- PDB id
- 7ST7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AGUUCAUAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ST7_059 not in the Motif Atlas
- Homologous match to HL_4WF9_056
- Geometric discrepancy: 0.1519
- The information below is about HL_4WF9_056
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_32735.2
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
7ST7|1|1|A|2471
7ST7|1|1|G|2472
7ST7|1|1|U|2473
7ST7|1|1|U|2474
7ST7|1|1|C|2475
7ST7|1|1|A|2476
7ST7|1|1|U|2477
7ST7|1|1|A|2478
7ST7|1|1|U|2479
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain 8
- Elongation factor G
- Chain F
- 50S ribosomal protein L36
- Chain f
- 50S ribosomal protein L6
- Chain m
- 50S ribosomal protein L16
Coloring options: