HL_7ST7_113
3D structure
- PDB id
- 7ST7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGAUGCAACGCG
- Length
- 12 nucleotides
- Bulged bases
- 7ST7|1|3|G|971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ST7_113 not in the Motif Atlas
- Geometric match to HL_1KH6_003
- Geometric discrepancy: 0.2454
- The information below is about HL_1KH6_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_27483.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 2
Unit IDs
7ST7|1|3|C|962
7ST7|1|3|G|963
7ST7|1|3|A|964
7ST7|1|3|U|965
7ST7|1|3|G|966
7ST7|1|3|C|967
7ST7|1|3|A|968
7ST7|1|3|A|969
7ST7|1|3|C|970
7ST7|1|3|G|971
7ST7|1|3|C|972
7ST7|1|3|G|973
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain 5
- Transfer RNA; tRNA
- Chain 6
- Transfer RNA; tRNA
- Chain N
- 30S ribosomal protein S9
- Chain O
- 30S ribosomal protein S10
- Chain R
- 30S ribosomal protein S13
- Chain S
- 30S ribosomal protein S14
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