HL_7SYP_017

3D structure

PDB id

7SYP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the wt IRES and 40S ribosome binary complex, open conformation. Structure 10(wt)

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CUAUUUUGUUGGUUUUCGG

Length

19 nucleotides

Bulged bases

7SYP|1|2|U|887

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SYP|1|2|C|884
7SYP|1|2|U|885
7SYP|1|2|A|886
7SYP|1|2|U|887
7SYP|1|2|U|888
7SYP|1|2|U|889
7SYP|1|2|U|890
7SYP|1|2|G|891
7SYP|1|2|U|892
7SYP|1|2|U|893
7SYP|1|2|G|894
7SYP|1|2|G|895
7SYP|1|2|U|896
7SYP|1|2|U|897
7SYP|1|2|U|898
7SYP|1|2|U|899
7SYP|1|2|C|900
7SYP|1|2|G|901
7SYP|1|2|G|902

Current chains

Chain 2

18S rRNA

Nearby chains

Chain H

eS6