HL_7SYP_042

3D structure

PDB id

7SYP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the wt IRES and 40S ribosome binary complex, open conformation. Structure 10(wt)

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CUUGCGAGUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SYP|1|z|C|304
7SYP|1|z|U|305
7SYP|1|z|U|306
7SYP|1|z|G|307
7SYP|1|z|C|308
7SYP|1|z|G|309
7SYP|1|z|A|310
7SYP|1|z|G|311
7SYP|1|z|U|312
7SYP|1|z|G|313

Current chains

Chain z

HCV IRES

Nearby chains

Chain b

eS26

Chain d

eS28