3D structure

PDB id
7TM3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the rabbit 80S ribosome stalled on a 2-TMD Rhodopsin intermediate in complex with the multipass translocon
Experimental method
ELECTRON MICROSCOPY
Resolution
3.25 Å

Loop

Sequence
GGCCGAAACGAUC
Length
13 nucleotides
Bulged bases
7TM3|1|K|C|1768
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7TM3|1|K|G|1760
7TM3|1|K|G|1761
7TM3|1|K|C|1762
7TM3|1|K|C|1763
7TM3|1|K|G|1764
7TM3|1|K|A|1765
7TM3|1|K|A|1766
7TM3|1|K|A|1767
7TM3|1|K|C|1768
7TM3|1|K|G|1769
7TM3|1|K|A|1770
7TM3|1|K|U|1771
7TM3|1|K|C|1772

Current chains

Chain K
28S ribosomal RNA

Nearby chains

Chain J
60S ribosomal protein L11

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.119 s