HL_7TOO_052

3D structure

PDB id

7TOO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GGGAGCUUCGGCGCCAGUGAAAUACC

Length

26 nucleotides

Bulged bases

7TOO|1|A25S|U|2472

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOO|1|A25S|G|2465
7TOO|1|A25S|G|2466
7TOO|1|A25S|G|2467
7TOO|1|A25S|A|2468
7TOO|1|A25S|G|2469
7TOO|1|A25S|C|2470
7TOO|1|A25S|U|2471
7TOO|1|A25S|U|2472
7TOO|1|A25S|C|2473
7TOO|1|A25S|G|2474
7TOO|1|A25S|G|2475
7TOO|1|A25S|C|2476
7TOO|1|A25S|G|2477
7TOO|1|A25S|C|2478
7TOO|1|A25S|C|2479
7TOO|1|A25S|A|2480
7TOO|1|A25S|G|2481
7TOO|1|A25S|U|2482
7TOO|1|A25S|G|2483
7TOO|1|A25S|A|2484
7TOO|1|A25S|A|2485
7TOO|1|A25S|A|2486
7TOO|1|A25S|U|2487
7TOO|1|A25S|A|2488
7TOO|1|A25S|C|2489
7TOO|1|A25S|C|2490

Current chains

Chain A25S

25S rRNA

Nearby chains

Chain APTN

Transfer RNA; tRNA