HL_7TOO_053

3D structure

PDB id

7TOO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

AAUUCAUUUU

Length

10 nucleotides

Bulged bases

7TOO|1|A25S|C|2539, 7TOO|1|A25S|A|2540

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOO|1|A25S|A|2535
7TOO|1|A25S|A|2536
7TOO|1|A25S|U|2537
7TOO|1|A25S|U|2538
7TOO|1|A25S|C|2539
7TOO|1|A25S|A|2540
7TOO|1|A25S|U|2541
7TOO|1|A25S|U|2542
7TOO|1|A25S|U|2543
7TOO|1|A25S|U|2544

Current chains

Chain A25S

25S rRNA

Nearby chains

Chain AL08

60S ribosomal protein L8-A