HL_7TOO_082

3D structure

PDB id

7TOO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GAUUUUAUGC

Length

10 nucleotides

Bulged bases

7TOO|1|A25S|U|1568, 7TOO|1|A25S|U|1569

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOO|1|A25S|G|1565
7TOO|1|A25S|A|1566
7TOO|1|A25S|U|1567
7TOO|1|A25S|U|1568
7TOO|1|A25S|U|1569
7TOO|1|A25S|U|1570
7TOO|1|A25S|A|1571
7TOO|1|A25S|U|1572
7TOO|1|A25S|G|1573
7TOO|1|A25S|C|1574

Current chains

Chain A25S

25S rRNA

Nearby chains

Chain A58S

5.8S ribosomal RNA; 5.8S rRNA

Chain AL25

60S ribosomal protein L25