HL_7TOP_044

3D structure

PDB id

7TOP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GUCGGUACGAU

Length

11 nucleotides

Bulged bases

7TOP|1|A25S|U|2091, 7TOP|1|A25S|A|2093

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOP|1|A25S|G|1949
7TOP|1|A25S|U|1950
7TOP|1|A25S|C|1951
7TOP|1|A25S|G|1952
7TOP|1|A25S|G|1953
7TOP|1|A25S|U|2091
7TOP|1|A25S|A|2093
7TOP|1|A25S|C|2094
7TOP|1|A25S|G|2095
7TOP|1|A25S|A|2096
7TOP|1|A25S|U|2097

Current chains

Chain A25S

25S rRNA

Nearby chains

Chain AL19

60S ribosomal protein L19-A