HL_7TOP_052
3D structure
- PDB id
- 7TOP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GGGAGCUUCGGCGCCAGUGAAAUACC
- Length
- 26 nucleotides
- Bulged bases
- 7TOP|1|A25S|U|2472
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7TOP|1|A25S|G|2465
7TOP|1|A25S|G|2466
7TOP|1|A25S|G|2467
7TOP|1|A25S|A|2468
7TOP|1|A25S|G|2469
7TOP|1|A25S|C|2470
7TOP|1|A25S|U|2471
7TOP|1|A25S|U|2472
7TOP|1|A25S|C|2473
7TOP|1|A25S|G|2474
7TOP|1|A25S|G|2475
7TOP|1|A25S|C|2476
7TOP|1|A25S|G|2477
7TOP|1|A25S|C|2478
7TOP|1|A25S|C|2479
7TOP|1|A25S|A|2480
7TOP|1|A25S|G|2481
7TOP|1|A25S|U|2482
7TOP|1|A25S|G|2483
7TOP|1|A25S|A|2484
7TOP|1|A25S|A|2485
7TOP|1|A25S|A|2486
7TOP|1|A25S|U|2487
7TOP|1|A25S|A|2488
7TOP|1|A25S|C|2489
7TOP|1|A25S|C|2490
Current chains
- Chain A25S
- 25S rRNA
Nearby chains
- Chain APTN
- Transfer RNA; tRNA
Coloring options: