HL_7TOR_015
3D structure
- PDB id
- 7TOR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGUUCAAAG
- Length
- 9 nucleotides
- Bulged bases
- 7TOR|1|A18S|G|821
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7TOR_015 not in the Motif Atlas
- Geometric match to HL_4V88_203
- Geometric discrepancy: 0.1506
- The information below is about HL_4V88_203
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_47383.2
- Basepair signature
- cWW-F-F-cWW-F-F
- Number of instances in this motif group
- 11
Unit IDs
7TOR|1|A18S|U|820
7TOR|1|A18S|G|821
7TOR|1|A18S|U|822
7TOR|1|A18S|U|823
7TOR|1|A18S|C|824
7TOR|1|A18S|A|825
7TOR|1|A18S|A|826
7TOR|1|A18S|A|827
7TOR|1|A18S|G|828
Current chains
- Chain A18S
- 18S rRNA
Nearby chains
- Chain AS04
- 40S ribosomal protein S4
- Chain AS09
- 40S ribosomal protein S9
- Chain AS24
- 40S ribosomal protein S24
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