HL_7TOR_017

3D structure

PDB id

7TOR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UAUUUUGUUGGUUUUCG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOR|1|A18S|U|885
7TOR|1|A18S|A|886
7TOR|1|A18S|U|887
7TOR|1|A18S|U|888
7TOR|1|A18S|U|889
7TOR|1|A18S|U|890
7TOR|1|A18S|G|891
7TOR|1|A18S|U|892
7TOR|1|A18S|U|893
7TOR|1|A18S|G|894
7TOR|1|A18S|G|895
7TOR|1|A18S|U|896
7TOR|1|A18S|U|897
7TOR|1|A18S|U|898
7TOR|1|A18S|U|899
7TOR|1|A18S|C|900
7TOR|1|A18S|G|901

Current chains

Chain A18S

18S rRNA

Nearby chains

Chain AS06

40S ribosomal protein S6