HL_7TOR_034
3D structure
- PDB id
- 7TOR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UAAGCAUA
- Length
- 8 nucleotides
- Bulged bases
- 7TOR|1|A28S|A|39
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7TOR_034 not in the Motif Atlas
- Homologous match to HL_8C3A_001
- Geometric discrepancy: 0.1188
- The information below is about HL_8C3A_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_36430.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
7TOR|1|A28S|U|37
7TOR|1|A28S|A|38
7TOR|1|A28S|A|39
7TOR|1|A28S|G|40
7TOR|1|A28S|C|41
7TOR|1|A28S|A|42
7TOR|1|A28S|U|43
7TOR|1|A28S|A|44
Current chains
- Chain A28S
- 28S rRNA
Nearby chains
- Chain AL13
- 60S ribosomal protein L13
- Chain AL15
- 60S ribosomal protein L15
- Chain AL28
- 60S ribosomal protein L27a
- Chain AL42
- eL42
Coloring options: