HL_7TOR_059

3D structure

PDB id

7TOR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCCGAAACGAUC

Length

12 nucleotides

Bulged bases

7TOR|1|A28S|C|1768

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOR|1|A28S|G|1761
7TOR|1|A28S|C|1762
7TOR|1|A28S|C|1763
7TOR|1|A28S|G|1764
7TOR|1|A28S|A|1765
7TOR|1|A28S|A|1766
7TOR|1|A28S|A|1767
7TOR|1|A28S|C|1768
7TOR|1|A28S|G|1769
7TOR|1|A28S|A|1770
7TOR|1|A28S|U|1771
7TOR|1|A28S|C|1772

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AS18

40S ribosomal protein S18