HL_7TOR_063

3D structure

PDB id

7TOR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUGGCCAUGGAAGUCGGAAUC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOR|1|A28S|G|1973
7TOR|1|A28S|U|1974
7TOR|1|A28S|G|1975
7TOR|1|A28S|G|1976
7TOR|1|A28S|C|1977
7TOR|1|A28S|C|1978
7TOR|1|A28S|A|1979
7TOR|1|A28S|U|1980
7TOR|1|A28S|G|1981
7TOR|1|A28S|G|1982
7TOR|1|A28S|A|1983
7TOR|1|A28S|A|1984
7TOR|1|A28S|G|1985
7TOR|1|A28S|U|1986
7TOR|1|A28S|C|1987
7TOR|1|A28S|G|1988
7TOR|1|A28S|G|1989
7TOR|1|A28S|A|1990
7TOR|1|A28S|A|1991
7TOR|1|A28S|U|1992
7TOR|1|A28S|C|1993

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL12

uL11