HL_7TOR_093

3D structure

PDB id

7TOR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GACAGAAAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7TOR_093 not in the Motif Atlas

Homologous match to HL_8C3A_057

Geometric discrepancy: 0.2887

The information below is about HL_8C3A_057

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_72777.1

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7TOR|1|A28S|G|4250
7TOR|1|A28S|A|4251
7TOR|1|A28S|C|4252
7TOR|1|A28S|A|4253
7TOR|1|A28S|G|4254
7TOR|1|A28S|A|4255
7TOR|1|A28S|A|4256
7TOR|1|A28S|A|4257
7TOR|1|A28S|C|4258

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL11

60S ribosomal protein L11