HL_7TTU_005

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUGAAUACAUAGC

Length

13 nucleotides

Bulged bases

7TTU|1|1|G|160

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7TTU_005 not in the Motif Atlas

Geometric match to HL_5J7L_025

Geometric discrepancy: 0.2938

The information below is about HL_5J7L_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87954.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

7

Unit IDs

7TTU|1|1|G|158
7TTU|1|1|U|159
7TTU|1|1|G|160
7TTU|1|1|A|161
7TTU|1|1|A|162
7TTU|1|1|U|163
7TTU|1|1|A|164
7TTU|1|1|C|165
7TTU|1|1|A|166
7TTU|1|1|U|167
7TTU|1|1|A|168
7TTU|1|1|G|169
7TTU|1|1|C|170

Current chains

Chain 1

23S rRNA

Nearby chains

Chain J

50S ribosomal protein L28