HL_7TTU_006

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

7TTU|1|1|A|199

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7TTU_006 not in the Motif Atlas

Geometric match to HL_7RQB_006

Geometric discrepancy: 0.1151

The information below is about HL_7RQB_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_06192.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

14

Unit IDs

7TTU|1|1|G|197
7TTU|1|1|A|198
7TTU|1|1|A|199
7TTU|1|1|A|200
7TTU|1|1|C|201
7TTU|1|1|A|202
7TTU|1|1|U|203
7TTU|1|1|C|204

Current chains

Chain 1

23S rRNA

Nearby chains

Chain J

50S ribosomal protein L28

Chain X

50S ribosomal protein L15