HL_7TTU_017

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGUUAAUG

Length

8 nucleotides

Bulged bases

7TTU|1|1|U|590, 7TTU|1|1|U|593

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7TTU_017 not in the Motif Atlas

Geometric match to HL_4WF9_017

Geometric discrepancy: 0.1448

The information below is about HL_4WF9_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50318.1

Basepair signature

cWW-cSH-F-F

Number of instances in this motif group

1

Unit IDs

7TTU|1|1|C|587
7TTU|1|1|G|588
7TTU|1|1|U|589
7TTU|1|1|U|590
7TTU|1|1|A|591
7TTU|1|1|A|592
7TTU|1|1|U|593
7TTU|1|1|G|594

Current chains

Chain 1

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L20

Chain D

50S ribosomal protein L21

Chain V

50S ribosomal protein L13