HL_7TTU_026

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

ACGAGCGAAU

Length

10 nucleotides

Bulged bases

7TTU|1|1|A|945

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7TTU_026 not in the Motif Atlas

Geometric match to HL_4WF9_003

Geometric discrepancy: 0.2538

The information below is about HL_4WF9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.6

Basepair signature

cWW-F

Number of instances in this motif group

21

Unit IDs

7TTU|1|1|A|920
7TTU|1|1|C|921
7TTU|1|1|G|922
7TTU|1|1|A|923
7TTU|1|1|G|924
7TTU|1|1|C|943
7TTU|1|1|G|944
7TTU|1|1|A|945
7TTU|1|1|A|946
7TTU|1|1|U|947

Current chains

Chain 1

23S rRNA

Nearby chains

Chain Y

50S ribosomal protein L16