HL_7TTU_029

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCACAGAG

Length

8 nucleotides

Bulged bases

7TTU|1|1|A|1094, 7TTU|1|1|G|1154

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7TTU_029 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.2813

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.2

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

7TTU|1|1|C|1087
7TTU|1|1|C|1088
7TTU|1|1|A|1092
7TTU|1|1|C|1093
7TTU|1|1|A|1094
7TTU|1|1|G|1154
7TTU|1|1|A|1155
7TTU|1|1|G|1156

Current chains

Chain 1

23S rRNA

Nearby chains