HL_7TTU_033

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGACAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7TTU_033 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.1439

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

7TTU|1|1|C|1400
7TTU|1|1|G|1401
7TTU|1|1|A|1402
7TTU|1|1|C|1403
7TTU|1|1|A|1404
7TTU|1|1|G|1405

Current chains

Chain 1

23S rRNA

Nearby chains

Chain J

50S ribosomal protein L28

Chain P

50S ribosomal protein L34