HL_7TTU_040

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

7TTU|1|1|U|1737

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7TTU_040 not in the Motif Atlas

Geometric match to HL_4LFB_009

Geometric discrepancy: 0.0797

The information below is about HL_4LFB_009

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

7TTU|1|1|C|1735
7TTU|1|1|U|1736
7TTU|1|1|U|1737
7TTU|1|1|C|1738
7TTU|1|1|G|1739
7TTU|1|1|G|1740

Current chains

Chain 1

23S rRNA

Nearby chains

Chain B

50S ribosomal protein L2