HL_7TTU_058

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AGUUCACAU

Length

9 nucleotides

Bulged bases

7TTU|1|1|U|2500

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7TTU_058 not in the Motif Atlas

Geometric match to HL_4V9F_062

Geometric discrepancy: 0.1559

The information below is about HL_4V9F_062

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_52011.1

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

7TTU|1|1|A|2498
7TTU|1|1|G|2499
7TTU|1|1|U|2500
7TTU|1|1|U|2501
7TTU|1|1|C|2502
7TTU|1|1|A|2503
7TTU|1|1|C|2504
7TTU|1|1|A|2505
7TTU|1|1|U|2506

Current chains

Chain 1

23S rRNA

Nearby chains

Chain R

50S ribosomal protein L36