HL_7TTU_059

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGUAGUCG

Length

8 nucleotides

Bulged bases

7TTU|1|1|G|2556

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7TTU_059 not in the Motif Atlas

Geometric match to HL_4WF9_057

Geometric discrepancy: 0.1871

The information below is about HL_4WF9_057

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_31585.4

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

20

Unit IDs

7TTU|1|1|U|2555
7TTU|1|1|G|2556
7TTU|1|1|U|2557
7TTU|1|1|A|2558
7TTU|1|1|G|2559
7TTU|1|1|U|2560
7TTU|1|1|C|2561
7TTU|1|1|G|2562

Current chains

Chain 1

23S rRNA

Nearby chains

Chain R

50S ribosomal protein L36