HL_7TTU_064

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

7TTU|1|1|G|2778, 7TTU|1|1|C|2782

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7TTU_064 not in the Motif Atlas

Geometric match to HL_4WF9_062

Geometric discrepancy: 0.1635

The information below is about HL_4WF9_062

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

7TTU|1|1|C|2772
7TTU|1|1|U|2773
7TTU|1|1|G|2774
7TTU|1|1|A|2775
7TTU|1|1|A|2776
7TTU|1|1|A|2777
7TTU|1|1|G|2778
7TTU|1|1|C|2779
7TTU|1|1|A|2780
7TTU|1|1|U|2781
7TTU|1|1|C|2782
7TTU|1|1|U|2783
7TTU|1|1|A|2784
7TTU|1|1|A|2785
7TTU|1|1|G|2786

Current chains

Chain 1

23S rRNA

Nearby chains

Chain R

50S ribosomal protein L36

Chain V

50S ribosomal protein L13