HL_7TTU_066

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AAAGAUGAU

Length

9 nucleotides

Bulged bases

7TTU|1|1|A|2840

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7TTU_066 not in the Motif Atlas

Geometric match to HL_4WF9_064

Geometric discrepancy: 0.1205

The information below is about HL_4WF9_064

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.6

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

7TTU|1|1|A|2839
7TTU|1|1|A|2840
7TTU|1|1|A|2841
7TTU|1|1|G|2842
7TTU|1|1|A|2843
7TTU|1|1|U|2844
7TTU|1|1|G|2845
7TTU|1|1|A|2846
7TTU|1|1|U|2847

Current chains

Chain 1

23S rRNA

Nearby chains

Chain L

50S ribosomal protein L3

Chain Z

50S ribosomal protein L17