HL_7TTU_067

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGUGAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7TTU_067 not in the Motif Atlas

Geometric match to HL_4WF9_059

Geometric discrepancy: 0.1619

The information below is about HL_4WF9_059

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7TTU|1|1|G|2876
7TTU|1|1|G|2877
7TTU|1|1|U|2878
7TTU|1|1|G|2879
7TTU|1|1|A|2880
7TTU|1|1|C|2881

Current chains

Chain 1

23S rRNA

Nearby chains

Chain A

50S ribosomal protein L19