HL_7TUT_027

3D structure

PDB id

7TUT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit 80S ribosome stalled on a 4-TMD Rhodopsin intermediate in complex with the multipass translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.88 Å

Loop

Sequence

GGCCGAAACGAUC

Length

13 nucleotides

Bulged bases

7TUT|1|K|C|1768

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TUT|1|K|G|1760
7TUT|1|K|G|1761
7TUT|1|K|C|1762
7TUT|1|K|C|1763
7TUT|1|K|G|1764
7TUT|1|K|A|1765
7TUT|1|K|A|1766
7TUT|1|K|A|1767
7TUT|1|K|C|1768
7TUT|1|K|G|1769
7TUT|1|K|A|1770
7TUT|1|K|U|1771
7TUT|1|K|C|1772

Current chains

Chain K

28S ribosomal RNA

Nearby chains

Chain J

60S ribosomal protein L11