HL_7U0H_050

3D structure

PDB id

7U0H (explore in PDB, NAKB, or RNA 3D Hub)

Description

State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall model

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

CGUUCAUAG

Length

9 nucleotides

Bulged bases

7U0H|1|1|U|2842, 7U0H|1|1|A|2845, 7U0H|1|1|U|2846

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7U0H_050 not in the Motif Atlas

Geometric match to HL_1WZ2_007

Geometric discrepancy: 0.1273

The information below is about HL_1WZ2_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

7U0H|1|1|C|2840
7U0H|1|1|G|2841
7U0H|1|1|U|2842
7U0H|1|1|U|2843
7U0H|1|1|C|2844
7U0H|1|1|A|2845
7U0H|1|1|U|2846
7U0H|1|1|A|2847
7U0H|1|1|G|2848

Current chains

Chain 1

25S rRNA

Nearby chains