HL_7U0H_064

3D structure

PDB id

7U0H (explore in PDB, NAKB, or RNA 3D Hub)

Description

State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall model

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

CAUUCUG

Length

7 nucleotides

Bulged bases

7U0H|1|6|U|14, 7U0H|1|6|C|15

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7U0H_064 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.3905

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.3

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

7U0H|1|6|C|11
7U0H|1|6|A|12
7U0H|1|6|U|13
7U0H|1|6|U|14
7U0H|1|6|C|15
7U0H|1|6|U|16
7U0H|1|6|G|17

Current chains

Chain 6

ITS2 rRNA

Nearby chains

Chain K

Proteasome-interacting protein CIC1