HL_7U2I_138

3D structure

PDB id

7U2I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

GCUAGGGGGCCCACCAGCCUACCAAAC

Length

27 nucleotides

Bulged bases

7U2I|1|2A|C|888, 7U2I|1|2A|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7U2I|1|2A|G|875
7U2I|1|2A|C|876
7U2I|1|2A|U|877
7U2I|1|2A|A|878
7U2I|1|2A|G|879
7U2I|1|2A|G|880
7U2I|1|2A|G|881
7U2I|1|2A|G|882
7U2I|1|2A|G|883
7U2I|1|2A|C|884
7U2I|1|2A|C|885
7U2I|1|2A|C|886
7U2I|1|2A|A|887
7U2I|1|2A|C|888
7U2I|1|2A|C|889
7U2I|1|2A|A|890
7U2I|1|2A|G|892
7U2I|1|2A|C|893
7U2I|1|2A|C|894
7U2I|1|2A|U|895
7U2I|1|2A|A|896
7U2I|1|2A|C|897
7U2I|1|2A|C|898
7U2I|1|2A|A|899
7U2I|1|2A|A|900
7U2I|1|2A|A|901
7U2I|1|2A|C|902

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2Q

50S ribosomal protein L16

Chain 2Z

50S ribosomal protein L25

Chain 2m

30S ribosomal protein S13

Chain 2w

Transfer RNA; tRNA